Protein Alignment SkpC and SK16

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_565297.1
• Gene: SK16 / 814848
• AraportID: AT2G03190
• Length: 170
• Species: Arabidopsis thaliana
• Alignment Length: 173
• Identity: 52/173 - (30%)
• Similarity: 87/173 - (50%)
• Gaps: 19/173 - (10%)

  Fly     1 MDAPTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYH 65
            |.:..|.|.|||...|..|...|:..:.|..|::    ::..:..:||..|...||:.::.:...
plant     1 MSSNKIVLTSSDDESFEVEEAVARKLKVIAHMID----DDCADKAIPLENVTGNILALVIEYCKK 61

  Fly    66 H------KDDDAHGAEGVELSPQSPHDISAWDANFI-NVDQPTLFEIILAANYLEIKGLVDLCCK 123
            |      ..||:..|....::.::.:::..|||.|: ..|..|:.::|||.|||.::.|:.|.|:
plant    62 HVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQ 126

  Fly   124 TVANMIRGKTPEEIRHTFNI-----PDE---IPSRTAQLGEDL 158
            |||:.::..:|||:|..|||     |:|   |....|...|||
plant   127 TVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFEDL 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	37/130 (28%)
		Skp1	115..>146	CDD:460222	14/35 (40%)
SK16	NP_565297.1	BTB_POZ_SKP1	5..132	CDD:349631	37/130 (28%)
		Skp1	118..165	CDD:460222	17/46 (37%)