Protein Alignment SkpC and SK14

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_565296.1
• Gene: SK14 / 814846
• AraportID: AT2G03170
• Length: 149
• Species: Arabidopsis thaliana
• Alignment Length: 159
• Identity: 58/159 - (36%)
• Similarity: 84/159 - (52%)
• Gaps: 18/159 - (11%)

  Fly     1 MDAPTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYH 65
            |.:..|.|.||||..|..|...|:..:.::.|:|...|..:    |||..|...|||.::.:...
plant     1 MSSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTE----VPLQNVTGKILSIVVEYCKK 61

  Fly    66 HKDDDAHGAEGVELSPQSPHDISAWDANFI-NVDQPTLFEIILAANYLEIKGLVDLCCKTVANMI 129
            |..|            :...:...||..|: ..||||:|:::||||||.||||:||..:|||:.|
plant    62 HVVD------------EESDEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRI 114

  Fly   130 RGKTPEEIRHTFNIPDEI-PSRTAQLGED 157
            :.|||||||..|||.::. |...|.:.::
plant   115 KDKTPEEIREIFNIENDFTPEEEAAVRKE 143

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	44/124 (35%)
		Skp1	115..>146	CDD:460222	19/30 (63%)
SK14	NP_565296.1	BTB_POZ_SKP1	5..114	CDD:349631	44/124 (35%)
		Skp1	100..147	CDD:460222	21/44 (48%)