Protein Alignment SkpC and SK19

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_565295.1
• Gene: SK19 / 814845
• AraportID: AT2G03160
• Length: 200
• Species: Arabidopsis thaliana
• Alignment Length: 176
• Identity: 58/176 - (32%)
• Similarity: 88/176 - (50%)
• Gaps: 34/176 - (19%)

  Fly     1 MDAPTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYH 65
            |.:..|.|.||||..|..|...|:..:.:..::|.....|.    :|:|.|...||:|::.:...
plant     1 MSSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNK----IPIPNVTGEILAKVIEYCKK 61

  Fly    66 HKDDD----------AHGAEGVELSPQSPHDISA-------------------WDANFI-NVDQP 100
            |.:||          ..|.:.||.:.:.|.|::.                   |||.|: :.|..
plant    62 HVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMKDFDIK 126

  Fly   101 TLFEIILAANYLEIKGLVDLCCKTVANMIRGKTPEEIRHTFNIPDE 146
            |:|:||||||||.::||.|||.||:|:.|:..||||:|..|||.::
plant   127 TIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIEND 172

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	40/137 (29%)
		Skp1	88..>146	CDD:279768	32/77 (42%)
SK19	NP_565295.1	Skp1	3..140	CDD:214704	40/140 (29%)
		SKP1	5..187	CDD:227528	57/172 (33%)
		Skp1	114..187	CDD:279768	32/59 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	51	1.000	Domainoid score	I4316
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	166	1.000	Inparanoid score	I1572
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	1	1.000	-	-		mtm992
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	12	11.940