Protein Alignment SkpC and SKP1

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_733779.1
• Gene: SKP1 / 6500
• HGNCID: 10899
• Length: 163
• Species: Homo sapiens
• Alignment Length: 144
• Identity: 83/144 - (57%)
• Similarity: 103/144 - (71%)
• Gaps: 2/144 - (1%)

  Fly     4 PTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVEND-ENAIVPLPKVNAFILSKILTWIYHHK 67
            |:|||:||||.||..:|..||.|.|||||||...:::: ::..||||.|||.||.|::.|..|||
Human     2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66

  Fly    68 DDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGK 132
            ||.. ..|..|...:...||..||..|:.|||.||||:|||||||:||||:|:.||||||||:||
Human    67 DDPP-PPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK 130

  Fly   133 TPEEIRHTFNIPDE 146
            ||||||.||||.::
Human   131 TPEEIRKTFNIKND 144

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	57/108 (53%)
		Skp1	88..>146	CDD:279768	42/57 (74%)
SKP1	NP_733779.1	BTB_POZ_SKP1	4..127	CDD:349631	68/123 (55%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	63..83		7/20 (35%)
		Interaction with the F-box domain of F-box proteins. /evidence=ECO:0000250	104..163		32/41 (78%)
		Skp1	113..160	CDD:396171	24/32 (75%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C165149263
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
User_Submission	0	0.000	Not matched by this tool.
	9	8.820