Protein Alignment SkpC and SkpF

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_611796.1
• Gene: SkpF / 37713
• FlyBaseID: FBgn0034863
• Length: 171
• Species: Drosophila melanogaster
• Alignment Length: 156
• Identity: 79/156 - (50%)
• Similarity: 105/156 - (67%)
• Gaps: 7/156 - (4%)

  Fly     4 PTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYHHKD 68
            |.|||:||||.||.|::..||.|.||||:||...||.:.:.::|||.||:.||.|:|.|..||::
  Fly     2 PVIKLQSSDGEIFETDIETAKCSSTIKTLLEDCPVEAENDTLIPLPNVNSTILKKVLIWAKHHRE 66

  Fly    69 DDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGKT 133
            |.|...| .|.:......|:.|||.|:::||.||||:|||||||:|..|::..|.||||||:|:|
  Fly    67 DIAEENE-EEAAKSVAVQITPWDAEFLSMDQGTLFELILAANYLDIPNLLNAACMTVANMIKGRT 130

  Fly   134 PEEIRHTFNIPDEI-PSRTAQLGEDL 158
            .||||.||:|.::. ||.     |||
  Fly   131 TEEIRQTFHITNDFSPSE-----EDL 151

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	62/123 (50%)
		Skp1	115..>146	CDD:460222	17/30 (57%)
SkpF	NP_611796.1	BTB_POZ_SKP1	3..126	CDD:349631	62/123 (50%)
		Skp1	112..157	CDD:460222	22/45 (49%)