Protein Alignment SkpC and SkpA

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_477390.1
• Gene: SkpA / 31016
• FlyBaseID: FBgn0025637
• Length: 162
• Species: Drosophila melanogaster
• Alignment Length: 155
• Identity: 92/155 - (59%)
• Similarity: 116/155 - (74%)
• Gaps: 2/155 - (1%)

  Fly     4 PTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYHHKD 68
            |:|||:|||..||.|:::.||.|.|||||||...:|:|||||||||.||:.||.|:|||.::||
  Fly     2 PSIKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENAIVPLPNVNSTILRKVLTWAHYHK- 65

  Fly    69 DDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGKT 133
            ||....|..|...:...||.:|||:|:.|||.||||:|||||||:||||::|.||||||||:|||
  Fly    66 DDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILAANYLDIKGLLELTCKTVANMIKGKT 130

  Fly   134 PEEIRHTFNI-PDEIPSRTAQLGED 157
            |||||.|||| .|..|:...|:.::
  Fly   131 PEEIRKTFNIKKDFSPAEEEQVRKE 155

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	74/123 (60%)
		Skp1	115..>146	CDD:460222	24/31 (77%)
SkpA	NP_477390.1	BTB_POZ_SKP1	4..126	CDD:349631	74/122 (61%)
		Skp1	112..159	CDD:460222	27/44 (61%)