Protein Alignment SkpC and Skp1

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: XP_063124657.1
• Gene: Skp1 / 287280
• RGDID: 1359648
• Length: 186
• Species: Rattus norvegicus
• Alignment Length: 157
• Identity: 88/157 - (56%)
• Similarity: 108/157 - (68%)
• Gaps: 3/157 - (1%)

  Fly     1 MDAPTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVEND-ENAIVPLPKVNAFILSKILTWIY 64
            |..|||||:||||.||..:|..||.|.|||||||...:::: ::..||||.|||.||.|::.|..
  Rat     1 MQMPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 65

  Fly    65 HHKDDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMI 129
            |||||.. ..|..|...:...||..||..|:.|||.||||:|||||||:||||:|:.||||||||
  Rat    66 HHKDDPP-PPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 129

  Fly   130 RGKTPEEIRHTFNIPDEI-PSRTAQLG 155
            :||||||||.||||.::. ....||:|
  Rat   130 KGKTPEEIRKTFNIKNDFTEEEEAQVG 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	69/124 (56%)
		Skp1	115..>146	CDD:460222	24/30 (80%)
Skp1	XP_063124657.1	None