Protein Alignment SkpC and skr-18

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_741300.1
• Gene: skr-18 / 260116
• WormBaseID: WBGene00018935
• Length: 183
• Species: Caenorhabditis elegans
• Alignment Length: 157
• Identity: 50/157 - (31%)
• Similarity: 84/157 - (53%)
• Gaps: 7/157 - (4%)

  Fly     6 IKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENA-IVPLP-KVNAFILSKILTWIYHHKD 68
            ::|.||:|.:...::||.:||.||.|.::....:.::.| |.|:| ..:.:.|..::.|...||.
 Worm    29 LQLASSNGEVLQADIRALQLSSTISTTIKELGYDKEDCAEIKPIPVDEHEYTLDLLIKWCDQHKG 93

  Fly    69 DDAHGAEGVELSPQSPHDISAWDANFINV-DQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGK 132
            ||...|:..:  .:....|.:||.:|.:| ....|..:|.||..|:|.|||:...:|||:.|.||
 Worm    94 DDPEIAKAEK--GKKKVVIPSWDQHFFSVLPMGNLLAVIKAAYDLDITGLVNYGTQTVASRINGK 156

  Fly   133 TPEEIRHTFNIPD--EIPSRTAQLGED 157
            :.||:|..|.:|:  :.||.:.....|
 Worm   157 SAEEMREIFQLPEPCQQPSTSTDTWAD 183

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	39/125 (31%)
		Skp1	115..>146	CDD:460222	14/32 (44%)
skr-18	NP_741300.1	BTB_POZ	28..153	CDD:453885	39/125 (31%)