Protein Alignment SkpC and skp1

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_595455.1
• Gene: skp1 / 2540917
• PomBaseID: SPBC409.05
• Length: 161
• Species: Schizosaccharomyces pombe
• Alignment Length: 157
• Identity: 74/157 - (47%)
• Similarity: 97/157 - (61%)
• Gaps: 11/157 - (7%)

  Fly     6 IKLESSDGMIFSTEVRAAKLSETIKTMLE-VSAVENDENAIVPLPKVNAFILSKILTWIYHHKDD 69
            |||.|||...|..:...|:.|..||.||| |..:    |..:|||.|::.:|.|:|.|..|||:|
pombe     4 IKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEI----NVPIPLPNVSSNVLRKVLEWCEHHKND 64

  Fly    70 DAHGAE---GVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRG 131
            ...|.|   .:.|...:  ||..||..|:.|||..||||:||:|||:||.|:|..||||||||||
pombe    65 LYSGTEEESDIRLKKST--DIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRG 127

  Fly   132 KTPEEIRHTFNIPDEI-PSRTAQLGED 157
            |:||:||.|||||::. |....|:.::
pombe   128 KSPEDIRKTFNIPNDFTPEEEEQIRKE 154

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	48/111 (43%)
		Skp1	88..>146	CDD:279768	39/57 (68%)
skp1	NP_595455.1	SKP1	1..161	CDD:227528	74/157 (47%)
		Skp1	1..110	CDD:214704	48/111 (43%)
		Skp1	84..158	CDD:279768	41/71 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	61	1.000	Domainoid score	I2981
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
TreeFam	1	0.960	-	-
	8	7.880