Protein Alignment SkpC and Skp1

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_035673.3
• Gene: Skp1 / 21402
• MGIID: 103575
• Length: 163
• Species: Mus musculus
• Alignment Length: 144
• Identity: 84/144 - (58%)
• Similarity: 103/144 - (71%)
• Gaps: 2/144 - (1%)

  Fly     4 PTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVEND-ENAIVPLPKVNAFILSKILTWIYHHK 67
            |||||:||||.||..:|..||.|.|||||||...:::: ::..||||.|||.||.|::.|..|||
Mouse     2 PTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66

  Fly    68 DDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGK 132
            ||.. ..|..|...:...||..||..|:.|||.||||:|||||||:||||:|:.||||||||:||
Mouse    67 DDPP-PPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK 130

  Fly   133 TPEEIRHTFNIPDE 146
            ||||||.||||.::
Mouse   131 TPEEIRKTFNIKND 144

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	69/124 (56%)
		Skp1	115..>146	CDD:460222	24/30 (80%)
Skp1	NP_035673.3	BTB_POZ_SKP1	3..127	CDD:349631	69/124 (56%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	63..83		7/20 (35%)
		Interaction with the F-box domain of F-box proteins. /evidence=ECO:0000250	104..163		32/41 (78%)
		Skp1	113..160	CDD:460222	24/32 (75%)