Protein Alignment SkpC and skr-6

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_507574.2
• Gene: skr-6 / 191763
• WormBaseID: WBGene00004812
• Length: 106
• Species: Caenorhabditis elegans
• Alignment Length: 101
• Identity: 37/101 - (36%)
• Similarity: 59/101 - (58%)
• Gaps: 10/101 - (9%)

  Fly    46 VPLPKVNAFILSKILTWIYHHKDDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAAN 110
            :||.||:|.|..||:.:..|         :|.. .|....:|..||:.|:.:||.|||:::||||
 Worm     4 IPLTKVDAKIFEKIIEYCEH---------QGTP-RPLLNGEIGEWDSEFLKLDQNTLFDLVLAAN 58

  Fly   111 YLEIKGLVDLCCKTVANMIRGKTPEEIRHTFNIPDE 146
            ||.|:.|.|:..:.:|||::..||.:||..|.:.::
 Worm    59 YLNIENLFDVTTQFIANMMKNNTPSQIRARFGVSNK 94

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	31/82 (38%)
		Skp1	115..>146	CDD:460222	10/30 (33%)
skr-6	NP_507574.2	BTB_POZ	<1..77	CDD:453885	31/82 (38%)
		Skp1	65..>93	CDD:460222	10/27 (37%)