Protein Alignment SkpC and skr-20

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_510192.1
• Gene: skr-20 / 181445
• WormBaseID: WBGene00004826
• Length: 173
• Species: Caenorhabditis elegans
• Alignment Length: 163
• Identity: 51/163 - (31%)
• Similarity: 80/163 - (49%)
• Gaps: 17/163 - (10%)

  Fly     3 APTIKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENA------IVPLPKVNAFILSKILT 61
            ||..||:|.||.||:.|....|....|........| ||.|.      :||.   ::.|:..::.
 Worm     7 APLYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGV-NDRNCERADPILVPF---HSSIVQAVIE 67

  Fly    62 WIYHHKDDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVA 126
            |:||::|:.....:    |....||.|.||..|.||:...||.::.|::.|.::.|:::.|...|
 Worm    68 WLYHYQDNPLARRD----SKIRYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGCAAAA 128

  Fly   127 NMIRGKTPEEIRHTFNI---PDEIPSRTAQLGE 156
            .:||||:.||||..:.|   .:::....|..||
 Worm   129 ELIRGKSTEEIRKIYGIRSDEEQMEEALANGGE 161

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	37/129 (29%)
		Skp1	115..>146	CDD:460222	12/33 (36%)
skr-20	NP_510192.1	Skp1	7..116	CDD:214704	36/116 (31%)
		Skp1	117..>155	CDD:460222	12/37 (32%)