Protein Alignment SkpC and skr-5

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_507393.1
• Gene: skr-5 / 180148
• WormBaseID: WBGene00004811
• Length: 145
• Species: Caenorhabditis elegans
• Alignment Length: 141
• Identity: 52/141 - (36%)
• Similarity: 83/141 - (58%)
• Gaps: 7/141 - (4%)

  Fly     6 IKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLPKVNAFILSKILTWIYHHKDDD 70
            :|:.:||.:.|....:.|..|:.:...:.::..|.     :||..|.:.|..|::.|..:|.:|.
 Worm     8 VKIVTSDDVEFIVSPKIANQSKLLADFVVLNQREP-----IPLKNVTSEIFKKVIEWCEYHAEDI 67

  Fly    71 AHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGKTPE 135
            ....:.||  .:...||..||..|:.||:.||||::|||.||:||||.::.||::||.|:||:||
 Worm    68 PKPPDNVE--EKRTDDIGEWDVEFLKVDKGTLFELVLAATYLDIKGLFNVTCKSIANSIKGKSPE 130

  Fly   136 EIRHTFNIPDE 146
            |||..||:.:|
 Worm   131 EIRAVFNLGNE 141

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	33/107 (31%)
		Skp1	88..>146	CDD:279768	32/57 (56%)
skr-5	NP_507393.1	Skp1	5..109	CDD:214704	33/107 (31%)
		Skp1	84..>141	CDD:279768	32/56 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160634
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	10	9.770