Protein Alignment SkpC and skr-3

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_507059.1
• Gene: skr-3 / 180081
• WormBaseID: WBGene00004809
• Length: 167
• Species: Caenorhabditis elegans
• Alignment Length: 144
• Identity: 64/144 - (44%)
• Similarity: 89/144 - (61%)
• Gaps: 7/144 - (4%)

  Fly     6 IKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENA---IVPLPKVNAFILSKILTWIYHHK 67
            |||.|||...|:...:....|:||..:::...:|...:.   .:||.||.:.||.||:||..||.
 Worm    10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITWCEHHA 74

  Fly    68 DDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGK 132
            ||:....:    ..:...|||.|||.|:.|||.||||||||||||:|:||:|:..:.||||::||
 Worm    75 DDEPKKVD----ENKKTVDISEWDAEFMKVDQGTLFEIILAANYLDIRGLLDVTTQNVANMMKGK 135

  Fly   133 TPEEIRHTFNIPDE 146
            ||.:||..|||.::
 Worm   136 TPSQIRTLFNIEND 149

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	47/110 (43%)
		Skp1	88..>146	CDD:279768	37/57 (65%)
skr-3	NP_507059.1	Skp1	7..117	CDD:214704	47/110 (43%)
		SKP1	10..167	CDD:227528	64/144 (44%)
		Skp1	91..165	CDD:279768	37/59 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160623
Domainoid	1	1.000	56	1.000	Domainoid score	I7318
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	10	9.810