DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment SkpC and skr-14

DIOPT Version :10

Sequence 1:	NP_608358.1	Gene:	SkpC / 32996	FlyBaseID:	FBgn0026175	Length:	158	Species:	Drosophila melanogaster
Sequence 2:	NP_504220.4	Gene:	skr-14 / 178839	WormBaseID:	WBGene00004820	Length:	168	Species:	Caenorhabditis elegans

Alignment Length:	24	Identity:	8/24 - (33%)
Similarity:	10/24 - (41%)	Gaps:	0/24 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    53 GMQLKYEATGGDLTGMNAVALYCQ 76
            |.||...|.|..|..:..:.|..|
Worm    45 GSQLTIPAKGITLKELGVMKLTAQ 68

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	8/24 (33%)
SkpC	NP_608358.1	Skp1	115..>146	CDD:460222
skr-14	NP_504220.4	BTB_POZ_SKP1	14..138	CDD:349631	8/24 (33%)
skr-14	NP_504220.4	Skp1	124..>161	CDD:460222
Blue background indicates that the domain is not in the aligned region.

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