Protein Alignment SkpC and skr-14

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_504220.4
• Gene: skr-14 / 178839
• WormBaseID: WBGene00004820
• Length: 168
• Species: Caenorhabditis elegans
• Alignment Length: 158
• Identity: 51/158 - (32%)
• Similarity: 81/158 - (51%)
• Gaps: 28/158 - (17%)

  Fly     2 DAPT----IKLESSDGMIFSTEVRAAKLSETIKTMLE--VSAVENDENA-IVPLPKVNAFILSKI 59
            |||.    .|:.|:||::.....:|.:.|:|:..::|  ...:||.|.. .:|:..||...:.|:
 Worm     7 DAPAAQIFYKIISNDGVVTKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMEKV 71

  Fly    60 LTWIYHHKDDDAHGAEGVELSPQSPHD---------ISAWDANFINVDQPTLFEIILAANYLEIK 115
            ..|.      :.|.|:.:      |.|         |..||..|:.::...||::|||:|:|:||
 Worm    72 AEWC------EKHNADAI------PEDNMNVLKTLTIPEWDQKFLKIEDEALFDLILASNFLDIK 124

  Fly   116 GLVDLCCKTVANMIRGKTPEEIRHTFNI 143
            ||:...||||:||.:|||..|:|..|.|
 Worm   125 GLMYYGCKTVSNMAKGKTTAELREIFGI 152

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	31/119 (26%)
		Skp1	88..>146	CDD:279768	27/56 (48%)
skr-14	NP_504220.4	Skp1	12..123	CDD:214704	31/122 (25%)
		Skp1	97..161	CDD:279768	27/56 (48%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160628
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.810