Protein Alignment SkpC and skr-8

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_503044.1
• Gene: skr-8 / 178495
• WormBaseID: WBGene00004814
• Length: 194
• Species: Caenorhabditis elegans
• Alignment Length: 166
• Identity: 58/166 - (34%)
• Similarity: 88/166 - (53%)
• Gaps: 21/166 - (12%)

  Fly     2 DAPTI-----KLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLP--KVNAFILSKI 59
            :||.:     |:||:||.:|.....|.|.|..:..::...|.| |..::.|:|  .|...||..:
 Worm    14 EAPVVAPIMYKVESNDGKVFEISDEAVKQSNILSNLISTCAPE-DVASMDPIPITNVTGNILKMV 77

  Fly    60 LTWIYHHKDDDAHGAEGVELSPQS-PHDISA--WDANFINVDQPTLFEIILAANYLEIKGLVDLC 121
            :.|...||      .|.:.:...| |.:|:.  ||.||:.:|...||::|:|.|||::.||::..
 Worm    78 IEWCEKHK------GEALPVEDDSVPKNINVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYG 136

  Fly   122 CKTVANMIRGKTPEEIRHTFNIP----DEIPSRTAQ 153
            ||.||||..||:|:|:|..|.||    ||...|.|:
 Worm   137 CKMVANMAIGKSPDELRIIFAIPTDEEDEAAERAAK 172

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	36/117 (31%)
		Skp1	88..>146	CDD:279768	28/63 (44%)
skr-8	NP_503044.1	Skp1	20..129	CDD:214704	36/115 (31%)
		Skp1	103..>161	CDD:279768	28/57 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160624
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.850