Protein Alignment SkpC and skr-10

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_502902.1
• Gene: skr-10 / 178447
• WormBaseID: WBGene00004816
• Length: 192
• Species: Caenorhabditis elegans
• Alignment Length: 166
• Identity: 59/166 - (35%)
• Similarity: 86/166 - (51%)
• Gaps: 27/166 - (16%)

  Fly     3 APTI-KLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDENAIVPLP--KVNAFILSKILTWIY 64
            ||.: |:||:||.:|.....|.|.|.|:..::...|.| |..::.|:|  .|...||..::.|..
 Worm    17 APIMYKVESNDGTVFEISDEAVKQSNTLSNLISTCAPE-DVASMDPIPITNVTGNILKMVIEWCE 80

  Fly    65 HHK------DDDAHGAEGVELSPQSPHDISA--WDANFINVDQPTLFEIILAANYLEIKGLVDLC 121
            .||      |||:           .|..|:.  ||.||:.:|...||::|:|.|||::.||::..
 Worm    81 KHKGEALPVDDDS-----------VPKHITVPEWDTNFLKIDNEVLFDLIVACNYLDVPGLMNYG 134

  Fly   122 CKTVANMIRGKTPEEIRHTFNIP----DEIPSRTAQ 153
            ||.||.|..||:|:|:|..|.||    ||...|.|:
 Worm   135 CKMVAMMAIGKSPDELRIIFAIPTDEEDEAAERAAK 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	38/118 (32%)
		Skp1	88..>146	CDD:279768	27/63 (43%)
skr-10	NP_502902.1	Skp1	18..127	CDD:214704	39/120 (33%)
		Skp1	101..>159	CDD:279768	27/57 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160625
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	6.860