Protein Alignment SkpC and skr-17

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_001379551.1
• Gene: skr-17 / 174257
• WormBaseID: WBGene00004823
• Length: 180
• Species: Caenorhabditis elegans
• Alignment Length: 160
• Identity: 52/160 - (32%)
• Similarity: 86/160 - (53%)
• Gaps: 12/160 - (7%)

  Fly     6 IKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVEND---ENAIVPLPKVNAFILSKILTWIYHHK 67
            ::|.||||.:...::||..||.|:...:.....:.:   |...||:..|..|.|..::.|...||
 Worm    25 LQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEWCDKHK 89

  Fly    68 DDDAHGAEGVELSPQSPHD--ISAWDANFIN-VDQPTLFEIILAANYLEIKGLVDLCCKTVANMI 129
            :||    ..:.|:.:...:  |.:||.:|:: :....||::|.||.:|::.||::..||||||..
 Worm    90 EDD----PAIALAEKDKKNICIPSWDRHFLSRLPMSNLFDLITAAYHLDVTGLINYGCKTVANSA 150

  Fly   130 RGKTPEEIRHTFNIPD--EIPSRTAQLGED 157
            :||..||:|..|.||:  |.||.:....:|
 Worm   151 KGKNAEEMRELFGIPEPWEQPSTSTATWDD 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	32/113 (28%)
		Skp1	88..>146	CDD:279768	25/60 (42%)
skr-17	NP_001379551.1	BTB_POZ_SKP1	24..150	CDD:349631	40/128 (31%)
		Skp1	137..>166	CDD:396171	15/28 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160632
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.850