Protein Alignment SkpC and skr-15

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_494662.1
• Gene: skr-15 / 173729
• WormBaseID: WBGene00004821
• Length: 184
• Species: Caenorhabditis elegans
• Alignment Length: 155
• Identity: 50/155 - (32%)
• Similarity: 83/155 - (53%)
• Gaps: 11/155 - (7%)

  Fly     8 LESSDGMIFSTEVRAAKLSETIK---TMLEVSAVENDENAI-VPLPKVNAFILSKILTWIYHHKD 68
            :||:|.::.....:|.|.|.|:.   |.|..|| ||.|:.: :|:.|||...|..::.|..|||.
 Worm    23 IESNDRVVLKISEQAIKQSATLSNSITNLGYSA-ENAESMVPIPIEKVNGKTLKLVVEWCEHHKA 86

  Fly    69 DDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGKT 133
            |..     .|..|.....:..||..|::::...|.:::.|:|:||:..|:..|||.:|.:.:|.:
 Worm    87 DPV-----PEAYPSGNTVLPVWDRKFVDIEHDALTDLVNASNFLEVMTLLTYCCKFIAGLAKGMS 146

  Fly   134 PEEIRHTFNIP-DEIPSRTAQLGED 157
            |||:|..|.|| ||...:..:.|::
 Worm   147 PEEMRVFFCIPTDEEDEKAERFGKE 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	33/109 (30%)
		Skp1	88..>146	CDD:279768	21/58 (36%)
skr-15	NP_494662.1	Skp1	20..127	CDD:214704	33/109 (30%)
		SKP1	23..176	CDD:227528	50/155 (32%)
		Skp1	101..167	CDD:279768	23/65 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160633
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	5.860