Protein Alignment SkpC and skr-1

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_492513.1
• Gene: skr-1 / 172775
• WormBaseID: WBGene00004807
• Length: 176
• Species: Caenorhabditis elegans
• Alignment Length: 156
• Identity: 72/156 - (46%)
• Similarity: 99/156 - (63%)
• Gaps: 5/156 - (3%)

  Fly     6 IKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDE--NA-IVPLPKVNAFILSKILTWIYHHK 67
            ||:.|||..||.......:||.||.|:|....::::|  || .:|:..|.|.||.|:::|..||.
 Worm    16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHHH 80

  Fly    68 DDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGK 132
            .|.. ..|..:...:...||.:||..|:.|||.||||:|||||||:||||:|:.||||||||:||
 Worm    81 SDPI-STEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK 144

  Fly   133 TPEEIRHTFNIPDEI-PSRTAQLGED 157
            :|||||.||||.::. |....|:.::
 Worm   145 SPEEIRRTFNIKNDFTPEEEEQIRKE 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	57/125 (46%)
		Skp1	115..>146	CDD:460222	23/30 (77%)
skr-1	NP_492513.1	BTB_POZ_SKP1	16..141	CDD:349631	57/125 (46%)
		Skp1	127..174	CDD:460222	25/44 (57%)