Protein Alignment SkpC and skr-1

DIOPT Version :9

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_492513.1
• Gene: skr-1 / 172775
• WormBaseID: WBGene00004807
• Length: 176
• Species: Caenorhabditis elegans
• Alignment Length: 156
• Identity: 72/156 - (46%)
• Similarity: 99/156 - (63%)
• Gaps: 5/156 - (3%)

  Fly     6 IKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDE--NA-IVPLPKVNAFILSKILTWIYHHK 67
            ||:.|||..||.......:||.||.|:|....::::|  || .:|:..|.|.||.|:::|..||.
 Worm    16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHHH 80

  Fly    68 DDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGK 132
            .|.. ..|..:...:...||.:||..|:.|||.||||:|||||||:||||:|:.||||||||:||
 Worm    81 SDPI-STEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK 144

  Fly   133 TPEEIRHTFNIPDEI-PSRTAQLGED 157
            :|||||.||||.::. |....|:.::
 Worm   145 SPEEIRRTFNIKNDFTPEEEEQIRKE 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	Skp1	6..114	CDD:214704	46/110 (42%)
		Skp1	88..>146	CDD:279768	41/57 (72%)
skr-1	NP_492513.1	Skp1	13..126	CDD:214704	46/110 (42%)
		SKP1	16..176	CDD:227528	72/156 (46%)
		Skp1	101..174	CDD:279768	43/70 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160626
Domainoid	1	1.000	56	1.000	Domainoid score	I7318
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	10	9.810