Protein Alignment SkpC and skr-2

DIOPT Version :10

• Sequence 1: NP_608358.1
• Gene: SkpC / 32996
• FlyBaseID: FBgn0026175
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_492512.1
• Gene: skr-2 / 172773
• WormBaseID: WBGene00004808
• Length: 174
• Species: Caenorhabditis elegans
• Alignment Length: 156
• Identity: 67/156 - (42%)
• Similarity: 97/156 - (62%)
• Gaps: 9/156 - (5%)

  Fly     6 IKLESSDGMIFSTEVRAAKLSETIKTMLEVSAVENDE--NA-IVPLPKVNAFILSKILTWIYHHK 67
            ||:.|||..||.......:||.|:.|:|....:::||  || .:|:..|.|.||.|::.|...|:
 Worm    16 IKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKVINWCTKHQ 80

  Fly    68 DDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFEIILAANYLEIKGLVDLCCKTVANMIRGK 132
            .|.....:..:.:..|..|   ||..|:::||.||||:|||||||:||||:|:.|::|||||:||
 Worm    81 SDPIPTEDSEKKTDGSIQD---WDKKFLDIDQGTLFELILAANYLDIKGLLDVACQSVANMIKGK 142

  Fly   133 TPEEIRHTFNIPDEIPSRTAQLGEDL 158
            :|:|||..|||.|:.   ||:..|.:
 Worm   143 SPDEIRRAFNIKDDF---TAEEREQI 165

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpC	NP_608358.1	BTB_POZ_SKP1	5..129	CDD:349631	52/125 (42%)
		Skp1	115..>146	CDD:460222	19/30 (63%)
skr-2	NP_492512.1	BTB_POZ_SKP1	16..139	CDD:349631	52/125 (42%)
		Skp1	125..172	CDD:460222	23/44 (52%)