Protein Alignment SkpD and SKP1

DIOPT Version :10

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_010615.3
• Gene: SKP1 / 851928
• SGDID: S000002736
• Length: 194
• Species: Saccharomyces cerevisiae
• Alignment Length: 195
• Identity: 65/195 - (33%)
• Similarity: 97/195 - (49%)
• Gaps: 40/195 - (20%)

  Fly     1 MDAPTIKLESSDGVIFSTEVKAAKLSETIKTML--------------------EVSAV------- 38
            |....:.|.|.:|..|:.:.|.|:.|..:|..|                    |.:..
Yeast     1 MVTSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNNG 65

  Fly    39 ----ENDENAVVPLPKVNAFILNKILTWAYHHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQ 99
                |:|:..|:|:|.|.:.:|.|::.||.||:|.:....:.::....:|  :..||..|:.|||
Yeast    66 DDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAP--VDSWDREFLKVDQ 128

  Fly   100 PILFEITVAANYLEIKGLEDLCCKTLANMIRGKTPEEIRQTFNIEDDL-PIDTA------ELGED 157
            .:|:||.:|||||.||.|.|..||.:|.||||::|||||:||||.:|. |.:.|      |..||
Yeast   129 EMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENEWAED 193

  Fly   158  157
            Yeast   194  193

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	BTB_POZ_SKP1	5..129	CDD:349631	45/154 (29%)
		Skp1	115..>153	CDD:460222	22/44 (50%)
SKP1	NP_010615.3	SKP1	3..194	CDD:227528	64/193 (33%)