Protein Alignment SkpD and SKP1

DIOPT Version :10

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_565123.1
• Gene: SKP1 / 843928
• AraportID: AT1G75950
• Length: 160
• Species: Arabidopsis thaliana
• Alignment Length: 153
• Identity: 70/153 - (45%)
• Similarity: 92/153 - (60%)
• Gaps: 4/153 - (2%)

  Fly     1 MDAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILNKILTWAYH 65
            |.|..|.|:||||..|..|...|..|:||..|:|...|:|.    ||||.|.:.||.|::.:...
plant     1 MSAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNG----VPLPNVTSKILAKVIEYCKR 61

  Fly    66 HKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMIR 130
            |.:.....||..|....|..|:..|||:|:.:||..|||:.:|||||.||.|.||.|:|:|:||:
plant    62 HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIK 126

  Fly   131 GKTPEEIRQTFNIEDDLPIDTAE 153
            ||||||||.||||::|...:..|
plant   127 GKTPEEIRTTFNIKNDFTPEEEE 149

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	BTB_POZ_SKP1	5..129	CDD:349631	52/123 (42%)
		Skp1	115..>153	CDD:460222	22/37 (59%)
SKP1	NP_565123.1	BTB_POZ_SKP1	5..125	CDD:349631	52/123 (42%)
		Skp1	111..158	CDD:460222	23/39 (59%)