Protein Alignment SkpD and SKP1

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_565123.1
• Gene: SKP1 / 843928
• AraportID: AT1G75950
• Length: 160
• Species: Arabidopsis thaliana
• Alignment Length: 153
• Identity: 70/153 - (45%)
• Similarity: 92/153 - (60%)
• Gaps: 4/153 - (2%)

  Fly     1 MDAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILNKILTWAYH 65
            |.|..|.|:||||..|..|...|..|:||..|:|...|:|.    ||||.|.:.||.|::.:...
plant     1 MSAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNG----VPLPNVTSKILAKVIEYCKR 61

  Fly    66 HKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMIR 130
            |.:.....||..|....|..|:..|||:|:.:||..|||:.:|||||.||.|.||.|:|:|:||:
plant    62 HVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIK 126

  Fly   131 GKTPEEIRQTFNIEDDLPIDTAE 153
            ||||||||.||||::|...:..|
plant   127 GKTPEEIRTTFNIKNDFTPEEEE 149

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	44/107 (41%)
		Skp1	88..>147	CDD:279768	36/58 (62%)
SKP1	NP_565123.1	BTB_POZ_SKP1	5..125	CDD:349631	52/123 (42%)
		Skp1	111..158	CDD:396171	23/39 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	51	1.000	Domainoid score	I4316
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	166	1.000	Inparanoid score	I1572
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	11	10.940