Protein Alignment SkpD and SK10

DIOPT Version :10

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_566695.1
• Gene: SK10 / 821740
• AraportID: AT3G21860
• Length: 152
• Species: Arabidopsis thaliana
• Alignment Length: 147
• Identity: 58/147 - (39%)
• Similarity: 79/147 - (53%)
• Gaps: 14/147 - (9%)

  Fly     1 MDAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILNKILTWA-Y 64
            |....|.|:||||..|..|.:||...:||..|.|....:|.    :|||:|...||..::.:. .
plant     1 MSTKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNG----IPLPEVTGKILEMVIEYCNK 61

  Fly    65 HHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMI 129
            ||.|    ||     .|.|..|:..||..|:...|..:|::.:|||||.||.|.||.|:|:|:||
plant    62 HHVD----AA-----NPCSDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMI 117

  Fly   130 RGKTPEEIRQTFNIEDD 146
            :..|.|..|:.||||:|
plant   118 KDNTVEHTRKFFNIEND 134

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	BTB_POZ_SKP1	5..129	CDD:349631	47/124 (38%)
		Skp1	115..>153	CDD:460222	17/32 (53%)
SK10	NP_566695.1	BTB_POZ_SKP1	5..117	CDD:349631	47/124 (38%)
		Skp1	103..149	CDD:460222	17/32 (53%)