Protein Alignment SkpD and SK9

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_566694.1
• Gene: SK9 / 821739
• AraportID: AT3G21850
• Length: 153
• Species: Arabidopsis thaliana
• Alignment Length: 150
• Identity: 61/150 - (40%)
• Similarity: 83/150 - (55%)
• Gaps: 17/150 - (11%)

  Fly     1 MDAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVEND--ENAVVPLPKVNAFILNKILTWA 63
            |....|.|:||||..|..|.:||:..:.|...:.    |||  :|. :|||.|...||..::.:.
plant     1 MSTKKIILKSSDGHSFEVEEEAARQCQIIIAHMS----ENDCTDNG-IPLPNVTGKILAMVIEYC 60

  Fly    64 -YHHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLAN 127
             .||.|    ||     .|.|..|:..||..|:..|...:|::..|||||.||.|.||.|:|:|.
plant    61 NKHHVD----AA-----NPCSDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAE 116

  Fly   128 MIRGKTPEEIRQTFNIEDDL 147
            :|:|.|||:||:.||||:||
plant   117 IIKGNTPEQIREFFNIENDL 136

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	39/110 (35%)
		Skp1	88..>147	CDD:279768	29/58 (50%)
SK9	NP_566694.1	BTB_POZ_SKP1	5..118	CDD:349631	47/126 (37%)
		Skp1	104..151	CDD:366656	19/32 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	51	1.000	Domainoid score	I4316
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	166	1.000	Inparanoid score	I1572
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	10	10.030