Protein Alignment SkpD and SK8

DIOPT Version :10

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_566692.1
• Gene: SK8 / 821737
• AraportID: AT3G21830
• Length: 152
• Species: Arabidopsis thaliana
• Alignment Length: 148
• Identity: 53/148 - (35%)
• Similarity: 82/148 - (55%)
• Gaps: 14/148 - (9%)

  Fly     1 MDAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILNKILTWA-Y 64
            |....|.|:||:|..|..|.:.|:..:||..|:|....:|    |:.:.|:.:.||..::.:. .
plant     1 MSTKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDN----VILVLKMTSEILEMVIEYCNK 61

  Fly    65 HHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMI 129
            ||.|    ||     .|.|..|:..||..|:..|:..:|.:|.|||:|..|.|..|..:|:|:||
plant    62 HHVD----AA-----NPCSDDDLEKWDKEFMEKDKSTIFALTNAANFLNNKSLLHLAGQTVADMI 117

  Fly   130 RGKTPEEIRQTFNIEDDL 147
            :|.||:::|:.||||:||
plant   118 KGNTPKQMREFFNIENDL 135

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	BTB_POZ_SKP1	5..129	CDD:349631	40/124 (32%)
		Skp1	115..>153	CDD:460222	17/33 (52%)
SK8	NP_566692.1	BTB_POZ_SKP1	5..117	CDD:349631	40/124 (32%)
		Skp1	103..150	CDD:460222	17/33 (52%)