Protein Alignment SkpD and SK20

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_001078065.1
• Gene: SK20 / 819203
• AraportID: AT2G45950
• Length: 352
• Species: Arabidopsis thaliana
• Alignment Length: 152
• Identity: 49/152 - (32%)
• Similarity: 76/152 - (50%)
• Gaps: 16/152 - (10%)

  Fly     1 MDAPTIK----LESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLP-KVNAFILNKIL 60
            |...|:|    |:::||.|...|.:.|.....|...:....|.:.:|..:.|| :||..:.:.||
plant     9 MKPETMKSYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLIL 73

  Fly    61 TWAYHHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTL 125
            .:...|           :|..:|..:...:|..||.:|...|.|:|.||:.|::|.|.||..:.|
plant    74 DYCRFH-----------QLPGRSNKERKTYDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRAL 127

  Fly   126 ANMIRGKTPEEIRQTFNIEDDL 147
            |.:|.||.|||||:.|::.|||
plant   128 ARIIEGKNPEEIREIFHLPDDL 149

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	29/112 (26%)
		Skp1	88..>147	CDD:279768	26/58 (45%)
SK20	NP_001078065.1	Skp1	15..116	CDD:214704	29/111 (26%)
		Skp1	90..153	CDD:279768	28/60 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910