Protein Alignment SkpD and MEO

DIOPT Version :10

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_565467.1
• Gene: MEO / 816536
• AraportID: AT2G20160
• Length: 150
• Species: Arabidopsis thaliana
• Alignment Length: 159
• Identity: 50/159 - (31%)
• Similarity: 80/159 - (50%)
• Gaps: 19/159 - (11%)

  Fly     1 MDAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILNKILTWAYH 65
            |.:..|.|.|||...|..:...|:..:.:..|::    ::..:..:.|..|...||..|:.:...
plant     1 MSSKKIVLTSSDDECFEIDEAVARKMQMVAHMID----DDCADKAIRLQNVTGKILAIIIEYCKK 61

  Fly    66 HKDDDDQAAEGEELTPQSPHDISPWDANFI-NVDQPILFEITVAANYLEIKGLEDLCCKTLANMI 129
            |.||.:  |:.|.:|         |||.|: |:|...||::..||:||.:.||::|..:.:|:..
plant    62 HVDDVE--AKNEFVT---------WDAEFVKNIDMDTLFKLLDAADYLIVIGLKNLIAQAIADYT 115

  Fly   130 RGKTPEEIRQTFNIEDDLPIDTAELGEDL 158
            ..||..|||:.||||:|.   |.|..|:|
plant   116 ADKTVNEIRELFNIENDY---TPEEEEEL 141

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	BTB_POZ_SKP1	5..129	CDD:349631	35/124 (28%)
		Skp1	115..>153	CDD:460222	15/37 (41%)
MEO	NP_565467.1	BTB_POZ_SKP1	5..114	CDD:349631	35/123 (28%)
		Skp1	102..148	CDD:460222	18/43 (42%)