Protein Alignment SkpD and SK16

DIOPT Version :10

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_565297.1
• Gene: SK16 / 814848
• AraportID: AT2G03190
• Length: 170
• Species: Arabidopsis thaliana
• Alignment Length: 153
• Identity: 45/153 - (29%)
• Similarity: 80/153 - (52%)
• Gaps: 11/153 - (7%)

  Fly     1 MDAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILNKILTWAYH 65
            |.:..|.|.|||...|..|...|:..:.|..|::    ::..:..:||..|...||..::.:...
plant     1 MSSNKIVLTSSDDESFEVEEAVARKLKVIAHMID----DDCADKAIPLENVTGNILALVIEYCKK 61

  Fly    66 H----KDDDDQAAE--GEELTPQSPHDISPWDANFI-NVDQPILFEITVAANYLEIKGLEDLCCK 123
            |    .||.|.:.|  .|.:..::.:::..|||.|: ..|...:.::.:|.|||.::.|..|.|:
plant    62 HVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQ 126

  Fly   124 TLANMIRGKTPEEIRQTFNIEDD 146
            |:|:.::..:|||:|:.||||:|
plant   127 TVADHMKDMSPEEVRELFNIEND 149

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	BTB_POZ_SKP1	5..129	CDD:349631	35/130 (27%)
		Skp1	115..>153	CDD:460222	14/32 (44%)
SK16	NP_565297.1	BTB_POZ_SKP1	5..132	CDD:349631	35/130 (27%)
		Skp1	118..165	CDD:460222	14/32 (44%)