Protein Alignment SkpD and skp1

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_001016519.1
• Gene: skp1 / 549273
• XenbaseID: XB-GENE-919631
• Length: 163
• Species: Xenopus tropicalis
• Alignment Length: 144
• Identity: 80/144 - (55%)
• Similarity: 104/144 - (72%)
• Gaps: 2/144 - (1%)

  Fly     4 PTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVEND-ENAVVPLPKVNAFILNKILTWAYHHK 67
            |:|||:||||.||..:|:.||.|.|||||||...:::: ::..||||.|||.||.|::.|..|||
 Frog     2 PSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHK 66

  Fly    68 DDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMIRGK 132
             ||....|.:|...:...||..||..|:.|||..|||:.:|||||:||||.|:.|||:||||:||
 Frog    67 -DDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK 130

  Fly   133 TPEEIRQTFNIEDD 146
            ||||||:||||::|
 Frog   131 TPEEIRKTFNIKND 144

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	54/108 (50%)
		Skp1	88..>147	CDD:279768	39/59 (66%)
skp1	NP_001016519.1	BTB_POZ_SKP1	4..127	CDD:349631	64/123 (52%)
		Skp1	113..160	CDD:396171	24/32 (75%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.110