Protein Alignment SkpD and skr-21

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_001366771.1
• Gene: skr-21 / 54162166
• WormBaseID: WBGene00004827
• Length: 176
• Species: Caenorhabditis elegans
• Alignment Length: 175
• Identity: 48/175 - (27%)
• Similarity: 82/175 - (46%)
• Gaps: 39/175 - (22%)

  Fly     4 PTIKLESSDGVIFSTE---VKAAKLSETIKTMLEVSAVENDENAVVPLP---KVNAFILNKILTW 62
            |..|::|.||.:|:.|   ::.:|....:...:        .|.|.|.|   .:.:|:|.||:.|
 Worm     8 PVFKIQSCDGQVFAVEDWFIQKSKCFSVVLAQM--------NNLVQPHPLKTSICSFVLVKIIEW 64

  Fly    63 AYHHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLAN 127
            .|||:::|...|:         ..::.||..||..:..||..:..||..|||.||.|:.|:.::.
 Worm    65 CYHHRNEDQDHAQ---------RILTAWDVQFIRTNSAILLHLAEAAFRLEIVGLLDVACRAVSI 120

  Fly   128 MIRGKTPEEIR-------------QTFNIED--DLPIDTAELGED 157
            |: |:|..|::             :..::||  :|.:|..|..||
 Worm   121 ML-GRTLNEVKLMLRVGGVESPSDEEDSLEDVLELEVDVDENEED 164

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	30/113 (27%)
		Skp1	88..>147	CDD:279768	21/73 (29%)
skr-21	NP_001366771.1	Skp1	7..107	CDD:214704	31/115 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910