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Protein Alignment SkpD and skr-21
DIOPT Version :9
Sequence 1: | NP_608357.2 |
Gene: | SkpD / 32995 |
FlyBaseID: | FBgn0026174 |
Length: | 158 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001366771.1 |
Gene: | skr-21 / 54162166 |
WormBaseID: | WBGene00004827 |
Length: | 176 |
Species: | Caenorhabditis elegans |
Alignment Length: | 175 |
Identity: | 48/175 - (27%) |
Similarity: | 82/175 - (46%) |
Gaps: | 39/175 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 PTIKLESSDGVIFSTE---VKAAKLSETIKTMLEVSAVENDENAVVPLP---KVNAFILNKILTW 62
|..|::|.||.:|:.| ::.:|....:...: .|.|.|.| .:.:|:|.||:.|
Worm 8 PVFKIQSCDGQVFAVEDWFIQKSKCFSVVLAQM--------NNLVQPHPLKTSICSFVLVKIIEW 64
Fly 63 AYHHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLAN 127
.|||:::|...|: ..::.||..||..:..||..:..||..|||.||.|:.|:.::.
Worm 65 CYHHRNEDQDHAQ---------RILTAWDVQFIRTNSAILLHLAEAAFRLEIVGLLDVACRAVSI 120
Fly 128 MIRGKTPEEIR-------------QTFNIED--DLPIDTAELGED 157
|: |:|..|:: :..::|| :|.:|..|..||
Worm 121 ML-GRTLNEVKLMLRVGGVESPSDEEDSLEDVLELEVDVDENEED 164
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5201 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11165 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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