DRSC/TRiP Functional Genomics Resources

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Protein Alignment SkpD and CG15800

DIOPT Version :10

Sequence 1:NP_608357.2 Gene:SkpD / 32995 FlyBaseID:FBgn0026174 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_611828.1 Gene:CG15800 / 37763 FlyBaseID:FBgn0034904 Length:157 Species:Drosophila melanogaster


Alignment Length:133 Identity:41/133 - (30%)
Similarity:67/133 - (50%) Gaps:4/133 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILNKILTWA-YHHKDD 69
            ::.|:.||...|..:...:.|..|:.|..|..|..||:.|:||..:::.:|.|||.|| ||.|.:
  Fly     2 VRFETRDGRTISVNLALLEKSLVIREMCRVGQVPEDEDFVLPLHGIHSNVLLKILLWAEYHEKHE 66

  Fly    70 DDQAAEGEELTPQSPHD--ISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMIRGK 132
            :....:.::..|....:  ||.||..|:.|:...:.:|....|||:|..|..||.:.|. .:..:
  Fly    67 EPAWVDSKDPLPAEEIELQISDWDKEFLRVEIDSICKIMEGCNYLDIPWLYKLCAQKLV-FLSSR 130

  Fly   133 TPE 135
            .||
  Fly   131 EPE 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SkpDNP_608357.2 BTB_POZ_SKP1 5..129 CDD:349631 39/125 (31%)
Skp1 115..>153 CDD:460222 6/21 (29%)
CG15800NP_611828.1 BTB_POZ 1..123 CDD:453885 38/120 (32%)

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