Protein Alignment SkpD and Skp1

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: XP_038941314.1
• Gene: Skp1 / 287280
• RGDID: 1359648
• Length: 165
• Species: Rattus norvegicus
• Alignment Length: 147
• Identity: 82/147 - (55%)
• Similarity: 105/147 - (71%)
• Gaps: 2/147 - (1%)

  Fly     1 MDAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVEND-ENAVVPLPKVNAFILNKILTWAY 64
            |..|||||:||||.||..:|:.||.|.|||||||...:::: ::..||||.|||.||.|::.|..
  Rat     1 MQMPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 65

  Fly    65 HHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMI 129
            ||| ||....|.:|...:...||..||..|:.|||..|||:.:|||||:||||.|:.|||:||||
  Rat    66 HHK-DDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 129

  Fly   130 RGKTPEEIRQTFNIEDD 146
            :||||||||:||||::|
  Rat   130 KGKTPEEIRKTFNIKND 146

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	54/108 (50%)
		Skp1	88..>147	CDD:279768	39/59 (66%)
Skp1	XP_038941314.1	BTB_POZ_SKP1	5..129	CDD:349631	65/124 (52%)
		Skp1	115..162	CDD:396171	24/32 (75%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166343138
Domainoid	1	1.000	83	1.000	Domainoid score	I8137
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	11	10.820