Protein Alignment SkpD and Skp1

DIOPT Version :10

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: XP_063124657.1
• Gene: Skp1 / 287280
• RGDID: 1359648
• Length: 186
• Species: Rattus norvegicus
• Alignment Length: 147
• Identity: 82/147 - (55%)
• Similarity: 105/147 - (71%)
• Gaps: 2/147 - (1%)

  Fly     1 MDAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVEND-ENAVVPLPKVNAFILNKILTWAY 64
            |..|||||:||||.||..:|:.||.|.|||||||...:::: ::..||||.|||.||.|::.|..
  Rat     1 MQMPTIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 65

  Fly    65 HHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMI 129
            ||| ||....|.:|...:...||..||..|:.|||..|||:.:|||||:||||.|:.|||:||||
  Rat    66 HHK-DDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 129

  Fly   130 RGKTPEEIRQTFNIEDD 146
            :||||||||:||||::|
  Rat   130 KGKTPEEIRKTFNIKND 146

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	BTB_POZ_SKP1	5..129	CDD:349631	65/124 (52%)
		Skp1	115..>153	CDD:460222	24/32 (75%)
Skp1	XP_063124657.1	None