Protein Alignment SkpD and skr-18

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_741300.1
• Gene: skr-18 / 260116
• WormBaseID: WBGene00018935
• Length: 183
• Species: Caenorhabditis elegans
• Alignment Length: 144
• Identity: 43/144 - (29%)
• Similarity: 81/144 - (56%)
• Gaps: 7/144 - (4%)

  Fly     6 IKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENA-VVPLP-KVNAFILNKILTWAYHHKD 68
            ::|.||:|.:...:::|.:||.||.|.::....:.::.| :.|:| ..:.:.|:.::.|...||.
 Worm    29 LQLASSNGEVLQADIRALQLSSTISTTIKELGYDKEDCAEIKPIPVDEHEYTLDLLIKWCDQHKG 93

  Fly    69 DDDQAAEGEELTPQSPHDISPWDANFINVDQPI--LFEITVAANYLEIKGLEDLCCKTLANMIRG 131
            ||.:.|:.|:  .:....|..||.:|.:| .|:  |..:..||..|:|.||.:...:|:|:.|.|
 Worm    94 DDPEIAKAEK--GKKKVVIPSWDQHFFSV-LPMGNLLAVIKAAYDLDITGLVNYGTQTVASRING 155

  Fly   132 KTPEEIRQTFNIED 145
            |:.||:|:.|.:.:
 Worm   156 KSAEEMREIFQLPE 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	31/111 (28%)
		Skp1	88..>147	CDD:279768	21/60 (35%)
skr-18	NP_741300.1	BTB_POZ	28..153	CDD:365784	36/126 (29%)
		Skp1	140..>169	CDD:366656	11/28 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160666
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.850