Protein Alignment SkpD and skp1

DIOPT Version :10

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_595455.1
• Gene: skp1 / 2540917
• PomBaseID: SPBC409.05
• Length: 161
• Species: Schizosaccharomyces pombe
• Alignment Length: 150
• Identity: 70/150 - (46%)
• Similarity: 93/150 - (62%)
• Gaps: 6/150 - (4%)

  Fly     6 IKLESSDGVIFSTEVKAAKLSETIKTMLE-VSAVENDENAVVPLPKVNAFILNKILTWAYHHKDD 69
            |||.|||...|..:...|:.|..||.||| |..:    |..:|||.|::.:|.|:|.|..|||:|
pombe     4 IKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEI----NVPIPLPNVSSNVLRKVLEWCEHHKND 64

  Fly    70 DDQAAEGE-ELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMIRGKT 133
            .....|.| ::..:...||..||..|:.|||.:||||.:|:|||:||.|.|..|||:|||||||:
pombe    65 LYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVLASNYLDIKPLLDTGCKTVANMIRGKS 129

  Fly   134 PEEIRQTFNIEDDLPIDTAE 153
            ||:||:||||.:|...:..|
pombe   130 PEDIRKTFNIPNDFTPEEEE 149

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	BTB_POZ_SKP1	5..129	CDD:349631	55/124 (44%)
		Skp1	115..>153	CDD:460222	22/37 (59%)
skp1	NP_595455.1	SKP1	1..161	CDD:227528	69/149 (46%)