Protein Alignment SkpD and skr-16

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_501128.2
• Gene: skr-16 / 191765
• WormBaseID: WBGene00004822
• Length: 181
• Species: Caenorhabditis elegans
• Alignment Length: 160
• Identity: 51/160 - (31%)
• Similarity: 80/160 - (50%)
• Gaps: 35/160 - (21%)

  Fly     8 LESSDGVIFSTE----------VKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILNKILTW 62
            |.||||..|.|:          ::|:|..||..|.::|..|:.|             .||::|.|
 Worm    34 LISSDGEKFQTDGHCIRHSKVLMQASKSLETPDTPIQVEKVQGD-------------TLNRVLEW 85

  Fly    63 AYHHKDDDDQAAE-GEEL-TPQSPHDISPWDANFI-NVDQPILFEITVAANYLEIKGLEDLCCKT 124
            ..:|:||....:: |..| .||       ||..:: ::|...|.::..|:|.|:::.|.|..|||
 Worm    86 CNNHRDDGKYVSQCGPSLRLPQ-------WDFRWLKDLDNQELVDLINASNDLQMQQLMDYACKT 143

  Fly   125 LANMIRGKTPEEIRQTFNIEDDLPIDTAEL 154
            :|||.:||.|.::|:.|.|..|  .:.|||
 Worm   144 VANMAKGKNPAQLRELFGILTD--EEEAEL 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	33/118 (28%)
		Skp1	88..>147	CDD:279768	21/59 (36%)
skr-16	NP_501128.2	Skp1	30..133	CDD:214704	33/118 (28%)
		Skp1	106..>165	CDD:279768	23/65 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160673
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.850