Protein Alignment SkpD and skr-6

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_507574.2
• Gene: skr-6 / 191763
• WormBaseID: WBGene00004812
• Length: 106
• Species: Caenorhabditis elegans
• Alignment Length: 102
• Identity: 36/102 - (35%)
• Similarity: 58/102 - (56%)
• Gaps: 14/102 - (13%)

  Fly    46 VPLPKVNAFILNKILTWAYHHKDDDDQAAEGEELTPQS--PHDISPWDANFINVDQPILFEITVA 108
            :||.||:|.|..||:.:..|         :|   ||:.  ..:|..||:.|:.:||..||::.:|
 Worm     4 IPLTKVDAKIFEKIIEYCEH---------QG---TPRPLLNGEIGEWDSEFLKLDQNTLFDLVLA 56

  Fly   109 ANYLEIKGLEDLCCKTLANMIRGKTPEEIRQTFNIED 145
            ||||.|:.|.|:..:.:|||::..||.:||..|.:.:
 Worm    57 ANYLNIENLFDVTTQFIANMMKNNTPSQIRARFGVSN 93

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	25/69 (36%)
		Skp1	88..>147	CDD:279768	23/58 (40%)
skr-6	NP_507574.2	Skp1	<2..62	CDD:214704	25/69 (36%)
		Skp1	37..>93	CDD:279768	23/55 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160665
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	6	5.810