Protein Alignment SkpD and skr-4

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_507857.1
• Gene: skr-4 / 191762
• WormBaseID: WBGene00004810
• Length: 159
• Species: Caenorhabditis elegans
• Alignment Length: 140
• Identity: 60/140 - (42%)
• Similarity: 86/140 - (61%)
• Gaps: 8/140 - (5%)

  Fly     6 IKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILNKILTWAYHHKDDD 70
            |||.|||...|:...|....|:||      |...:::  .:|||||.:.||.||:||..||.||:
 Worm    10 IKLISSDDKTFTVSRKVISQSKTI------SGFTSED--TIPLPKVTSAILEKIITWCEHHADDE 66

  Fly    71 DQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMIRGKTPE 135
            .:..|..|...:...:||.|||.|:.|||..||||.:|||||:|:||.::..:.:|||::||||.
 Worm    67 PKKVEKIEKGNKKTVEISEWDAEFMKVDQGTLFEIILAANYLDIRGLLEVTTQNVANMMKGKTPS 131

  Fly   136 EIRQTFNIED 145
            ::|..|.|::
 Worm   132 QVRTLFKIDN 141

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	47/107 (44%)
		Skp1	88..>147	CDD:279768	30/58 (52%)
skr-4	NP_507857.1	Skp1	7..110	CDD:214704	47/107 (44%)
		SKP1	10..159	CDD:227528	60/140 (43%)
		Skp1	84..157	CDD:279768	30/58 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160672
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	9	8.770