DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment SkpD and skr-19

DIOPT Version :9

Sequence 1:	NP_608357.2	Gene:	SkpD / 32995	FlyBaseID:	FBgn0026174	Length:	158	Species:	Drosophila melanogaster
Sequence 2:	NP_510193.4	Gene:	skr-19 / 181446	WormBaseID:	WBGene00004825	Length:	155	Species:	Caenorhabditis elegans

Alignment Length:	142	Identity:	40/142 - (28%)
Similarity:	71/142 - (50%)	Gaps:	16/142 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MDAPTI--KLESSDGVIFSTEVKAAKLSETIKTMLE---VSAVENDENAVVPLPKVNAFILNKIL 60
            ::.|.|  ||.|:||..|..:.:...:...|:.:..   :..:..|:...:.| ::.|.::.|::
Worm     3 VEEPVILYKLRSTDGQRFLADRRTIGMIGRIEDLFRNAGLDLIPADQLQPIQL-EIPATVMRKVI 66

  Fly    61 TWAYHHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTL 125
            .|..|||.|...    :|..|:: :||..|||:|:.|...:||:|..||....:.||..:||:.:
Worm    67 EWCDHHKHDPPY----DESEPET-NDIPDWDASFLMVRHNMLFDIIRAARDFTVPGLFAMCCRVV 126

  Fly   126 ANMIRGKTPEEI 137
                 |:.|.||
Worm   127 -----GQNPREI 133

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	31/112 (28%)
SkpD	NP_608357.2	Skp1	88..>147	CDD:279768	18/50 (36%)
skr-19	NP_510193.4	BTB_POZ_SKP1	9..129	CDD:349631	35/130 (27%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.920