Protein Alignment SkpD and skr-20

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_510192.1
• Gene: skr-20 / 181445
• WormBaseID: WBGene00004826
• Length: 173
• Species: Caenorhabditis elegans
• Alignment Length: 150
• Identity: 49/150 - (32%)
• Similarity: 75/150 - (50%)
• Gaps: 14/150 - (9%)

  Fly     3 APTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENA------VVPLPKVNAFILNKILT 61
            ||..||:|.||.||:.|....|....|........| ||.|.      :||.   ::.|:..::.
 Worm     7 APLYKLKSEDGQIFNVERGPMKFCAFINQKFIDHGV-NDRNCERADPILVPF---HSSIVQAVIE 67

  Fly    62 WAYHHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLA 126
            |.||:: |:..|....::   ..||.|.||..|.||:..:||.:..|::.|.::.|.::.|...|
 Worm    68 WLYHYQ-DNPLARRDSKI---RYHDFSEWDKQFFNVESGVLFALLNASHALGVEDLMNMGCAAAA 128

  Fly   127 NMIRGKTPEEIRQTFNIEDD 146
            .:||||:.||||:.:.|..|
 Worm   129 ELIRGKSTEEIRKIYGIRSD 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	34/113 (30%)
		Skp1	88..>147	CDD:279768	22/58 (38%)
skr-20	NP_510192.1	Skp1	7..116	CDD:214704	36/116 (31%)
		Skp1	90..154	CDD:279768	22/58 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160657
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.850