Protein Alignment SkpD and skr-5

DIOPT Version :10

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_507393.1
• Gene: skr-5 / 180148
• WormBaseID: WBGene00004811
• Length: 145
• Species: Caenorhabditis elegans
• Alignment Length: 141
• Identity: 49/141 - (34%)
• Similarity: 81/141 - (57%)
• Gaps: 7/141 - (4%)

  Fly     6 IKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAFILNKILTWAYHHKDDD 70
            :|:.:||.|.|....|.|..|:.:...:.:     ::...:||..|.:.|..|::.|..:|.:|.
 Worm     8 VKIVTSDDVEFIVSPKIANQSKLLADFVVL-----NQREPIPLKNVTSEIFKKVIEWCEYHAEDI 67

  Fly    71 DQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMIRGKTPE 135
            .:..:..|  .:...||..||..|:.||:..|||:.:||.||:||||.::.||::||.|:||:||
 Worm    68 PKPPDNVE--EKRTDDIGEWDVEFLKVDKGTLFELVLAATYLDIKGLFNVTCKSIANSIKGKSPE 130

  Fly   136 EIRQTFNIEDD 146
            |||..||:.::
 Worm   131 EIRAVFNLGNE 141

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	BTB_POZ_SKP1	5..129	CDD:349631	39/122 (32%)
		Skp1	115..>153	CDD:460222	17/32 (53%)
skr-5	NP_507393.1	BTB_POZ_SKP1	8..124	CDD:349631	39/122 (32%)
		Skp1	110..>141	CDD:460222	17/30 (57%)