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Protein Alignment SkpD and skr-3
DIOPT Version :9
Sequence 1: | NP_608357.2 |
Gene: | SkpD / 32995 |
FlyBaseID: | FBgn0026174 |
Length: | 158 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_507059.1 |
Gene: | skr-3 / 180081 |
WormBaseID: | WBGene00004809 |
Length: | 167 |
Species: | Caenorhabditis elegans |
Alignment Length: | 151 |
Identity: | 65/151 - (43%) |
Similarity: | 91/151 - (60%) |
Gaps: | 7/151 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 IKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENA---VVPLPKVNAFILNKILTWAYHHK 67
|||.|||...|:...|....|:||..:::...:|...:. .:||.||.:.||.||:||..||.
Worm 10 IKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDTIPLQKVTSTILEKIITWCEHHA 74
Fly 68 DDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMIRGK 132
||:.:..:..:.|. |||.|||.|:.|||..||||.:|||||:|:||.|:..:.:|||::||
Worm 75 DDEPKKVDENKKTV----DISEWDAEFMKVDQGTLFEIILAANYLDIRGLLDVTTQNVANMMKGK 135
Fly 133 TPEEIRQTFNIEDDLPIDTAE 153
||.:||..||||:|...:..|
Worm 136 TPSQIRTLFNIENDFSEEERE 156
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C160160659 |
Domainoid |
1 |
1.000 |
56 |
1.000 |
Domainoid score |
I7318 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5201 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S272 |
OMA |
1 |
1.010 |
- |
- |
|
QHG54148 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1412723at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000367 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11165 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X346 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
10 | 9.810 |
|
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