Protein Alignment SkpD and skr-7

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_504221.1
• Gene: skr-7 / 178840
• WormBaseID: WBGene00004813
• Length: 194
• Species: Caenorhabditis elegans
• Alignment Length: 164
• Identity: 55/164 - (33%)
• Similarity: 88/164 - (53%)
• Gaps: 21/164 - (12%)

  Fly     2 DAPTI-----KLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLP--KVNAFILNKI 59
            :||.:     |:|||||.::....:|.|.|.|:..::. :.|.||..::.|:|  .|...|:..:
 Worm    14 EAPIVAPIMYKVESSDGQVYEISDEAVKQSNTLSNLIS-TCVANDVASMDPIPITNVTGNIMKMV 77

  Fly    60 LTWAYHHKDDDDQAAEGEELTPQS---PHDIS--PWDANFINVDQPILFEITVAANYLEIKGLED 119
            :.|...||        ||.|..:.   |.:|:  .||.||:.:|..:||::.||:|:|::.||..
 Worm    78 IEWCEKHK--------GETLPVEDDSVPKNITVPEWDTNFLKIDNDVLFDLIVASNFLDVPGLMS 134

  Fly   120 LCCKTLANMIRGKTPEEIRQTFNIEDDLPIDTAE 153
            ..||.:|||..||:|:|:|..|.|..|...:.||
 Worm   135 YACKMVANMAIGKSPDEMRVLFAIPTDEEDEAAE 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	36/119 (30%)
		Skp1	88..>147	CDD:279768	25/60 (42%)
skr-7	NP_504221.1	Skp1	20..129	CDD:214704	36/117 (31%)
		Skp1	103..>160	CDD:279768	25/56 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160674
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.810