Protein Alignment SkpD and skr-14

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_504220.4
• Gene: skr-14 / 178839
• WormBaseID: WBGene00004820
• Length: 168
• Species: Caenorhabditis elegans
• Alignment Length: 164
• Identity: 56/164 - (34%)
• Similarity: 85/164 - (51%)
• Gaps: 17/164 - (10%)

  Fly     2 DAPT----IKLESSDGVIFSTEVKAAKLSETIKTMLE--VSAVENDENA-VVPLPKVNAFILNKI 59
            |||.    .|:.|:|||:.....||.:.|:|:..::|  ...:||.|.. .:|:..||...:.|:
 Worm     7 DAPAAQIFYKIISNDGVVTKMSEKAVQQSKTLSNLIENLGYTIENIETRDPIPVTNVNGKTMEKV 71

  Fly    60 LTWAYHHKDD---DDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLC 121
            ..|...|..|   :|.....:.||      |..||..|:.::...||::.:|:|:|:||||....
 Worm    72 AEWCEKHNADAIPEDNMNVLKTLT------IPEWDQKFLKIEDEALFDLILASNFLDIKGLMYYG 130

  Fly   122 CKTLANMIRGKTPEEIRQTFNIEDDLPIDTAELG 155
            |||::||.:|||..|:|:.|.|..| ..|.||.|
 Worm   131 CKTVSNMAKGKTTAELREIFGINTD-EQDAAEGG 163

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	32/113 (28%)
		Skp1	88..>147	CDD:279768	24/58 (41%)
skr-14	NP_504220.4	Skp1	12..123	CDD:214704	32/116 (28%)
		Skp1	97..161	CDD:279768	26/64 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160664
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.810