Protein Alignment SkpD and skr-9

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_503043.1
• Gene: skr-9 / 178494
• WormBaseID: WBGene00004815
• Length: 194
• Species: Caenorhabditis elegans
• Alignment Length: 164
• Identity: 53/164 - (32%)
• Similarity: 83/164 - (50%)
• Gaps: 21/164 - (12%)

  Fly     2 DAPTI-----KLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAF--ILNKI 59
            :||.:     |:||:||.:|....:|.|.|..:..::...|.| |..::.|:|..|..  ||..:
 Worm    14 EAPVVAPIMYKVESNDGKVFEISDEAVKQSNILSNLISTCAPE-DVASMDPIPITNVIGNILKMV 77

  Fly    60 LTWAYHHKDDDDQAAEGEELTPQSPH-----DISPWDANFINVDQPILFEITVAANYLEIKGLED 119
            :.|...||        ||.|..:...     ::..||.||:.:|..:||::.||.|||::.||.:
 Worm    78 IEWCEKHK--------GEALPVEDDSVPKHVNVPEWDTNFLKIDNDVLFDLIVACNYLDVPGLMN 134

  Fly   120 LCCKTLANMIRGKTPEEIRQTFNIEDDLPIDTAE 153
            ..||.:|.|..||:|:|:|..|.|..|...:.||
 Worm   135 YGCKIVAMMAIGKSPDELRIIFAIPTDEEDEAAE 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	35/119 (29%)
		Skp1	88..>147	CDD:279768	25/58 (43%)
skr-9	NP_503043.1	Skp1	20..129	CDD:214704	35/117 (30%)
		Skp1	103..>161	CDD:279768	25/57 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160663
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	8	7.810