Protein Alignment SkpD and skr-9

DIOPT Version :10

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_503043.1
• Gene: skr-9 / 178494
• WormBaseID: WBGene00004815
• Length: 194
• Species: Caenorhabditis elegans
• Alignment Length: 164
• Identity: 53/164 - (32%)
• Similarity: 83/164 - (50%)
• Gaps: 21/164 - (12%)

  Fly     2 DAPTI-----KLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLPKVNAF--ILNKI 59
            :||.:     |:||:||.:|....:|.|.|..:..::...|.| |..::.|:|..|..  ||..:
 Worm    14 EAPVVAPIMYKVESNDGKVFEISDEAVKQSNILSNLISTCAPE-DVASMDPIPITNVIGNILKMV 77

  Fly    60 LTWAYHHKDDDDQAAEGEELTPQSPH-----DISPWDANFINVDQPILFEITVAANYLEIKGLED 119
            :.|...||        ||.|..:...     ::..||.||:.:|..:||::.||.|||::.||.:
 Worm    78 IEWCEKHK--------GEALPVEDDSVPKHVNVPEWDTNFLKIDNDVLFDLIVACNYLDVPGLMN 134

  Fly   120 LCCKTLANMIRGKTPEEIRQTFNIEDDLPIDTAE 153
            ..||.:|.|..||:|:|:|..|.|..|...:.||
 Worm   135 YGCKIVAMMAIGKSPDELRIIFAIPTDEEDEAAE 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	BTB_POZ_SKP1	5..129	CDD:349631	40/135 (30%)
		Skp1	115..>153	CDD:460222	14/37 (38%)
skr-9	NP_503043.1	BTB_POZ_SKP1	22..144	CDD:349631	40/130 (31%)
		Skp1	130..>161	CDD:460222	13/30 (43%)