DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment SkpD and skr-10

DIOPT Version :9

Sequence 1:	NP_608357.2	Gene:	SkpD / 32995	FlyBaseID:	FBgn0026174	Length:	158	Species:	Drosophila melanogaster
Sequence 2:	NP_502902.1	Gene:	skr-10 / 178447	WormBaseID:	WBGene00004816	Length:	192	Species:	Caenorhabditis elegans

Alignment Length:	158	Identity:	54/158 - (34%)
Similarity:	83/158 - (52%)	Gaps:	15/158 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 APTI-KLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDENAVVPLP--KVNAFILNKILTWAY 64
            ||.: |:||:||.:|....:|.|.|.|:..::...|.| |..::.|:|  .|...||..::.|..
Worm    17 APIMYKVESNDGTVFEISDEAVKQSNTLSNLISTCAPE-DVASMDPIPITNVTGNILKMVIEWCE 80

  Fly    65 HHKDD----DDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTL 125
            .||.:    ||.:.......|:       ||.||:.:|..:||::.||.|||::.||.:..||.:
Worm    81 KHKGEALPVDDDSVPKHITVPE-------WDTNFLKIDNEVLFDLIVACNYLDVPGLMNYGCKMV 138

  Fly   126 ANMIRGKTPEEIRQTFNIEDDLPIDTAE 153
            |.|..||:|:|:|..|.|..|...:.||
Worm   139 AMMAIGKSPDELRIIFAIPTDEEDEAAE 166

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	36/114 (32%)
SkpD	NP_608357.2	Skp1	88..>147	CDD:279768	25/58 (43%)
skr-10	NP_502902.1	Skp1	18..127	CDD:214704	37/116 (32%)
skr-10	NP_502902.1	Skp1	101..>159	CDD:279768	26/64 (41%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160661
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	6.860