DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment SkpD and skr-17

DIOPT Version :9

Sequence 1:	NP_608357.2	Gene:	SkpD / 32995	FlyBaseID:	FBgn0026174	Length:	158	Species:	Drosophila melanogaster
Sequence 2:	NP_001379551.1	Gene:	skr-17 / 174257	WormBaseID:	WBGene00004823	Length:	180	Species:	Caenorhabditis elegans

Alignment Length:	144	Identity:	45/144 - (31%)
Similarity:	76/144 - (52%)	Gaps:	6/144 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 IKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVEND---ENAVVPLPKVNAFILNKILTWAYHHK 67
            ::|.||||.:...:::|..||.|:...:.....:.:   |...||:..|..|.|..::.|...||
Worm    25 LQLTSSDGHLLQGDIRALLLSSTLAATIRELGYDKEYCAELKPVPVNNVVGFTLKLLIEWCDKHK 89

  Fly    68 DDDDQAAEGEELTPQSPHDISPWDANFIN-VDQPILFEITVAANYLEIKGLEDLCCKTLANMIRG 131
            :||...|..|:  .:....|..||.:|:: :....||::..||.:|::.||.:..|||:||..:|
Worm    90 EDDPAIALAEK--DKKNICIPSWDRHFLSRLPMSNLFDLITAAYHLDVTGLINYGCKTVANSAKG 152

  Fly   132 KTPEEIRQTFNIED 145
            |..||:|:.|.|.:
Worm   153 KNAEEMRELFGIPE 166

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	31/111 (28%)
SkpD	NP_608357.2	Skp1	88..>147	CDD:279768	22/59 (37%)
skr-17	NP_001379551.1	BTB_POZ_SKP1	24..150	CDD:349631	38/126 (30%)
skr-17	NP_001379551.1	Skp1	137..>166	CDD:396171	14/28 (50%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160668
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.850