Protein Alignment SkpD and skr-1

DIOPT Version :9

• Sequence 1: NP_608357.2
• Gene: SkpD / 32995
• FlyBaseID: FBgn0026174
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_492513.1
• Gene: skr-1 / 172775
• WormBaseID: WBGene00004807
• Length: 176
• Species: Caenorhabditis elegans
• Alignment Length: 151
• Identity: 68/151 - (45%)
• Similarity: 95/151 - (62%)
• Gaps: 4/151 - (2%)

  Fly     6 IKLESSDGVIFSTEVKAAKLSETIKTMLEVSAVENDE--NA-VVPLPKVNAFILNKILTWAYHHK 67
            ||:.|||..||.......:||.||.|:|....::::|  || .:|:..|.|.||.|:::|..||
 Worm    16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHH- 79

  Fly    68 DDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLEIKGLEDLCCKTLANMIRGK 132
            ..|..:.|..:...:...||..||..|:.|||..|||:.:|||||:||||.|:.|||:||||:||
 Worm    80 HSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGK 144

  Fly   133 TPEEIRQTFNIEDDLPIDTAE 153
            :|||||:||||::|...:..|
 Worm   145 SPEEIRRTFNIKNDFTPEEEE 165

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpD	NP_608357.2	Skp1	6..114	CDD:214704	43/110 (39%)
		Skp1	88..>147	CDD:279768	37/58 (64%)
skr-1	NP_492513.1	Skp1	13..126	CDD:214704	43/110 (39%)
		SKP1	16..176	CDD:227528	68/151 (45%)
		Skp1	101..174	CDD:279768	39/65 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160160662
Domainoid	1	1.000	56	1.000	Domainoid score	I7318
eggNOG	1	0.900	-	-		E1_COG5201
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S272
OMA	1	1.010	-	-		QHG54148
OrthoDB	1	1.010	-	-		D1412723at2759
OrthoFinder	1	1.000	-	-		FOG0000367
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11165
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X346
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	10	9.810