DRSC/TRiP Functional Genomics Resources

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Protein Alignment SkpD and AgaP_AGAP011535

DIOPT Version :9

Sequence 1:NP_608357.2 Gene:SkpD / 32995 FlyBaseID:FBgn0026174 Length:158 Species:Drosophila melanogaster
Sequence 2:XP_309973.2 Gene:AgaP_AGAP011535 / 1271221 VectorBaseID:AGAP011535 Length:117 Species:Anopheles gambiae


Alignment Length:114 Identity:33/114 - (28%)
Similarity:52/114 - (45%) Gaps:19/114 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DAPTIKLESSDGVIFSTEVKAAKLSETIKTMLEVSA--VENDENAVVPLPKVNAFILNKILTWAY 64
            ||..:||.||||..|..:.:.|..|.|||.||....  .||:.|. |...::.:.:|.|:..:..
Mosquito    20 DAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENEANE-VNFREIPSHVLEKVCMYFT 83

  Fly    65 HHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFEITVAANYLE 113
            :.....:.:.|    .|:.|  |:|          .|..|:.:|||:|:
Mosquito    84 YKVRYTNSSTE----IPEFP--IAP----------EIALELLMAANFLD 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SkpDNP_608357.2 Skp1 6..114 CDD:214704 31/110 (28%)
Skp1 88..>147 CDD:279768 7/26 (27%)
AgaP_AGAP011535XP_309973.2 Skp1 21..117 CDD:214704 32/113 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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