DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zld and wdn

DIOPT Version :9

Sequence 1:NP_001285466.1 Gene:zld / 32994 FlyBaseID:FBgn0259789 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster


Alignment Length:576 Identity:133/576 - (23%)
Similarity:206/576 - (35%) Gaps:163/576 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1037 LDQQQQQQQALILADSLPHSSSSPTSSSPPPTMPMPLT---------TITAPQLLPLQPPPPHIT 1092
            ||:..|....|.|:..:.....:.||||   |:|..||         ::|.     |:|.||:..
  Fly    91 LDESAQNNTELNLSSDVCRDDLAATSSS---TVPSTLTSDNHSSSEFSVTF-----LRPEPPNAF 147

  Fly  1093 STMPMPPT----MHMPIMPPPPQCYQQLQPLDPTMSYHTIIGSGPEAHTGTAGGGYSNQITTSDG 1153
            :..|...|    ...|:...|.|.:||                              :|:.....
  Fly   148 TNSPFKKTSSSGTSTPVKLSPEQLHQQ------------------------------HQLQMPQS 182

  Fly  1154 QILQLMPTSLFAPYAPLSPYSVAAQRSPQEGDLPPVHTLTTALHAHQQGGQQEAQTPTLTVLSTP 1218
            |:||..|.   .|.|......|..:..|:|.. ||...:|..     :..:.|...|:.|:....
  Fly   183 QLLQRKPK---LPAATAVRLKVFKEEPPEEKH-PPEQVVTKV-----EVCESELLPPSFTIFQQA 238

  Fly  1219 YS----------PTVSSSRATPALEMDMATLMQHHQDYEMEQYQMQHQQLD-------------- 1259
            .|          |..::|...| ||:|.|.|               |:.||              
  Fly   239 KSAESVADAASMPPPAASETKP-LEVDPAPL---------------HKCLDCNGLLLETPDEVAK 287

  Fly  1260 -QMQQHQQQLDH-----QQQQQILADQTQTMAQQPLAKKRRGGNATP------------------ 1300
             :...|:.:|.:     |::.::||...:.:.......::......|                  
  Fly   288 HEAAAHRLRLTYRCSECQREFELLAGLKKHLKTHRTEGRKDTWKKCPDCGKCLKLGSMWMHRKIH 352

  Fly  1301 STTKRRRNSSVGS-----------TSPHSTTLPSGRIKCLECDKEFTKNCYLTQHNKSFHSGEYP 1354
            |..|:.:....|.           ...||:..|   .:|.||.|.|.:..:|.:|.| :|:....
  Fly   353 SDNKKYQCDICGQKFVQKINLTHHARIHSSEKP---YECPECQKRFQERSHLQRHQK-YHAQTRS 413

  Fly  1355 FRCQKCGKRFQSEDVYTTHLGRHRTQDKPHKCELCPKQFHHKTDLRRHVEAIHTGLKQHMCDICE 1419
            :||:||||.:::|.....|...|..| :|..|.:|.|.|...:.|::| ..||||::...|:.|.
  Fly   414 YRCEKCGKMYKTERCLKVHNLVHLEQ-RPFACTVCDKSFISNSKLKQH-SNIHTGMRPFKCNYCP 476

  Fly  1420 KGFCR-----KDHLRKHLETH-------NRPRVVGKKSAA-----AAAAAAAAAAVTATAGLGGA 1467
            :.|..     |...|:|...|       |.|....|||..     ||||||||||.::.......
  Fly   477 RDFTNFPNWLKHTRRRHKVDHKTGEHLENIPSYCSKKSTTNKAQKAAAAAAAAAAASSAVNPNEL 541

  Fly  1468 PAAGSIKAAFARSLTVTAVSSEPGAGVAIPSAPATATCAPVSVS--ASALVQAVNP 1521
            .|:..:||  ..:||.||..: |.........|..||.|.:.::  |...:|.|:|
  Fly   542 SASSELKA--KANLTSTAAPA-PAKQARKKKQPQQATLAALGITLPAGTALQQVHP 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zldNP_001285466.1 zf-C2H2_jaz 552..577 CDD:288983
LIM 1328..1389 CDD:259829 21/60 (35%)
C2H2 Zn finger 1328..1349 CDD:275368 8/20 (40%)
C2H2 Zn finger 1357..1377 CDD:275368 7/19 (37%)
C2H2 Zn finger 1386..1407 CDD:275368 6/20 (30%)
zf-H2C2_2 1398..1422 CDD:290200 8/23 (35%)
zf-C2H2 1413..1435 CDD:278523 6/26 (23%)
C2H2 Zn finger 1415..1435 CDD:275368 6/24 (25%)
wdnNP_476900.1 C2H2 Zn finger 301..321 CDD:275368 3/19 (16%)
RPB9 333..425 CDD:224510 22/95 (23%)
C2H2 Zn finger 333..352 CDD:275368 1/18 (6%)
zf-H2C2_2 344..369 CDD:290200 3/24 (13%)
zf-C2H2 358..380 CDD:278523 1/21 (5%)
C2H2 Zn finger 360..380 CDD:275368 1/19 (5%)
zf-H2C2_2 372..395 CDD:290200 7/25 (28%)
zf-C2H2 386..408 CDD:278523 8/22 (36%)
C2H2 Zn finger 388..436 CDD:275368 17/48 (35%)
zf-H2C2_2 400..425 CDD:290200 10/25 (40%)
C2H2 Zn finger 416..433 CDD:275368 6/16 (38%)
zf-H2C2_2 429..453 CDD:290200 8/24 (33%)
C2H2 Zn finger 444..464 CDD:275368 6/20 (30%)
zf-H2C2_2 457..481 CDD:290200 9/24 (38%)
C2H2 Zn finger 472..493 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457196
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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